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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885447.1_cds_XP_016439425.1_34981
CDS Infomation

[gene=LOC107765314] [db_xref=GeneID:107765314] [protein=synaptotagmin-1-like] [protein_id=XP_016439425.1] [location=complement(join(3167..3574,3659..3905,4011..4087,4398..4472,7265..7366,7457..7575,8535..8658,8751..8801,8888..8986,10527..10637))] [gbkey=CDS]
Sequence

ATGGGTTTTGTGAGTACTATATTAGGCTTCTGTGGATTTGGAGTTGGGATTTCATTTGGC
CTGGTGATCGGATACTATCTGTTCATCTACTTCCAGCCTTGTGATGTTAAGGACCCTGTT
ATTCGTCCATTGGTTGAGCGAGATACTAAAAGCTTGCAGCAGATACTGTCTGAAATTCCT
CTTTGGATTAAATGTCCGGACTATGACCGTGTGGACTGGCTCAACAAGTTTCTCGAGTAT
ATGTGGCCTTACCTGGACAAGGCAATTTGCAGAACTGCAAAAGATATTGCGGCACCAATT
ATTGCTGAGCAAATACCAAAATATAAAATTGATTCTGTCGAATTTGAAACACTAACTTTG
GGGTCCTTACCTCCTACTTTCCAGGGGATGAAGGTCTATGTTACTGACGAAAAAGAATTG
ATCATGGAACCATCATTAAAGTGGGCAGGAAATCCTAATGTCACTGTTGCGGTCAAAGCA
TTCGGATTAAAGGCAACTGTTCAGGTTGTGGACTTGCAGGTTTTTGCAGCTCCACGTATT
ACTTTGAAGCCTCTGGTTCCAAGCTTTCCATGTTTTGCCAAAATCCTGGTGTCCCTCATG
GAAAAGCCACATGTTGACTTTGGATTGAAGCTTTTGGGTGCTGATCTTATGTCCGTTCCT
GGCTTGTACAGGTTTGTCCAGGAGACCATTAAAGATCAGGTTGCTAACATGTATCTGTGG
CCTAAAACTCTAGAAGTGCAGATTTTGGATCCATCCAAAGCAATGAAAAAACCTGTAGGG
ATCCTGCATGTGAAGATTCTGAGGGCAATGAAGCTGAGAAAGAAAGATTTAATGGGTGGA
TCTGATCCTTACGTAAAAGTTAAGCTCACTGAGTCAAAACTTCCTTCAAAGAAAACCACT
GTGAAGCATAAGAATTTGAATCCAGAGTGGGATGAGGAATTTAATATGGTTGTCAAAGAT
CCAGAAACACAAGCATTGGAGCTCTCTGTTTATGATTGGGAGCAGATTGGCAAACATGAT
AAGATGGGTATGAATGTTATTCCACTGAAAGATTTGACCCCTGATGAATCAAAAACTATG
ACTCTGGATCTCCTAAAGAATATGGATTCTAATGATACTCAGAATGATAAGGACCGCGGT
CAGATCATGGTGGAATTAACCTACAAACCATTTAAGGAGGACGAGGTGCCGAAAGAATTT
GAAGAGTCAGATGCAGTACAAAAAGTTCCAGAAGGAACGCCACCAGGGGGAGGCGTCCTT
ATGATTACGGTCCATGAAGCTCAAGATGTTGAAGGAAAGCACCATACTAATCCATATGTC
AGGATTATTTTCAGAGGGGAGGAAAGAAAAACTAAGGTACAAAATTTCCTCTTCTTTCTA
ATCCTTCATTGCTCTCTACTTGGCAGGCAATGA

Peptide Sequence

PEP ID

XP_016439425.1
PEP Infomation

PREDICTED: synaptotagmin-1-like [Nicotiana tabacum]
Sequence

MGFVSTILGFCGFGVGISFGLVIGYYLFIYFQPCDVKDPVIRPLVERDTKSLQQILSEIP
LWIKCPDYDRVDWLNKFLEYMWPYLDKAICRTAKDIAAPIIAEQIPKYKIDSVEFETLTL
GSLPPTFQGMKVYVTDEKELIMEPSLKWAGNPNVTVAVKAFGLKATVQVVDLQVFAAPRI
TLKPLVPSFPCFAKILVSLMEKPHVDFGLKLLGADLMSVPGLYRFVQETIKDQVANMYLW
PKTLEVQILDPSKAMKKPVGILHVKILRAMKLRKKDLMGGSDPYVKVKLTESKLPSKKTT
VKHKNLNPEWDEEFNMVVKDPETQALELSVYDWEQIGKHDKMGMNVIPLKDLTPDESKTM
TLDLLKNMDSNDTQNDKDRGQIMVELTYKPFKEDEVPKEFEESDAVQKVPEGTPPGGGVL
MITVHEAQDVEGKHHTNPYVRIIFRGEERKTKVQNFLFFLILHCSLLGRQ

Transcript Sequence

Gene sequence data has not been registered.